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REST-for-Physics
v2.3
Rare Event Searches ToolKit for Physics
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REST-for-Physics
v2.3
Rare Event Searches ToolKit for Physics
|
A process that allows to define several signal IDs as veto channels. The data from the vetoes is then removed from the events and stored as separate observables.
TRestRawVetoAnalysisProcess allows to define several signal IDs as vetoes and to group them. This process adds the observables veto_PeakTime and veto_MaxPeakAmplitude to the analysis tree.
To define a veto you have two options:
Option 1: Define the veto by adding a parameter "vetoSignalId" with a comma-separated list of the veto signal IDs. In this case the observables "veto_PeakTime" and "veto_MaxPeakAmplitude" are added to the analysis tree. Each observable contains a map with a different key for each signal ID.
You can add parameters "baseLineRange" and "range":
Option 2: Put the vetoes in groups by adding xml blocks "vetoGroup" with the parameters "name" and "signalIDs".
In this case, for each group a different pair of observables is saved. In this example they would be named "veto_PeakTime_top", "veto_PeakTime_front","veto_PeakTime_left" (and the same for "MaxPeakAmplitude"), where each again contains a map with the signal ID as key.
Two observable "VetoAboveThreshold" and "NVetoAboveThreshold" can be added to the analysis tree by adding a parameter "threshold" to the rml. If for an event any of the veto signals is above the specified threshold, "VetoAboveThreshold" is set to 1, else it is 0. "NVetoAboveThreshold" contains the number of vetoes which have a signal above threshold.
By adding a parameter "timeWindow" with two comma-separated values (e.g. "300,500") to the rml, two additional observables are added to the analysis Tree: "VetoInTimeWindow" is set to 1, when the peak time of at least one veto signal is within the specified time window, else it is 0. "NVetoInTimeWindow" contains the number of veto signals per event, where the peak time is within the window.
The noise signals in the veto data is removed with the GetPointsOverThreshold() method. This can be controlled by defining following parameter in the RML file: PointsOverThresholdPars: sets the parameters of the PointsOverThreshold() method. Standard values are "1.5, 1.5, 4". Signals that are identified as noise get the amplitude 0 assigned. It is advised to run the TRestRawBaseLineCorrectionProcess before on the veto signals.
The method GetVetoSignalIDs() returns a vector<double> of the veto signal IDs, if the vetoes were defined using option 1. In case the vetoes were defined in groups, one can use the method GetVetoGroups(), which returns a std::pair<vector<string>,vector<string>>, which contains in the first entry the name of the veto group, and in the second the comma separated string of the corresponding signal IDs. The signal IDs can susequently be converted into a vector<double> by using the TRestStringHelper::StringToElements() method.
RESTsoft - Software for Rare Event Searches with TPCs
History of developments:
2019-Nov: First implementation Cristina Margalejo/Javier Galan
2020-Dec: Added multi-VETO channel capability Konrad Altenmueller
2021-Jan: Added veto groups and observables accordingly Konrad Altenmueller
2021-Mar: Added threshold parameter and observables "VetoAboveThreshold" and "NVetoAboveThreshold" Konrad Altenmueller
2022-Feb: Added noise removal Konrad Altenmueller
Definition at line 32 of file TRestRawVetoAnalysisProcess.h.
#include <TRestRawVetoAnalysisProcess.h>
Public Member Functions | |
| ClassDefOverride (TRestRawVetoAnalysisProcess, 2) | |
| std::string | GetGroupIds (std::string groupName) |
| Function that returns a string of the signal IDs for the specified veto group. | |
| Int_t | GetGroupIndex (std::string groupName) |
| Function that returns the index of a specified veto group within the group name vector and ID vector. | |
| RESTValue | GetInputEvent () const override |
| Get pointer to input event. Must be implemented in the derived class. | |
| RESTValue | GetOutputEvent () const override |
| Get pointer to output event. Must be implemented in the derived class. | |
| const char * | GetProcessName () const override |
| Returns the name of this process. | |
| std::pair< std::vector< std::string >, std::vector< std::string > > | GetVetoGroups () |
| Returns the veto group names and IDs. | |
| std::vector< double > | GetVetoSignalIDs () |
| Returns the veto IDs, if they where defined in a list. | |
| double | GetVetoSignalIDs (Int_t index) |
| void | InitProcess () override |
| Function to use in initialization of process members before starting to process the event. | |
| void | LoadConfig (const std::string &configFilename, const std::string &name="") |
| Function to load the configuration from an external configuration file. More... | |
| TRestEventProcess * | Maker () |
| Returns a new instance of this class. | |
| void | PrintMetadata () override |
| It prints out the process parameters stored in the metadata structure. | |
| TRestEvent * | ProcessEvent (TRestEvent *inputEvent) override |
| The main processing event function. | |
| TRestRawVetoAnalysisProcess () | |
| Default constructor. | |
| TRestRawVetoAnalysisProcess (const char *configFilename) | |
| Constructor loading data from a config file. More... | |
| ~TRestRawVetoAnalysisProcess () | |
| Default destructor. | |
 Public Member Functions inherited from TRestEventProcess | |
| virtual Bool_t | AddInputFile (const std::string &file) |
| bool | ApplyCut () |
| virtual void | BeginOfEventProcess (TRestEvent *inputEvent=nullptr) |
| Begin of event process, preparation work. Called right before ProcessEvent() | |
| ClassDefOverride (TRestEventProcess, 3) | |
| virtual void | EndOfEventProcess (TRestEvent *inputEvent=nullptr) |
| End of event process. Nothing to do. Called directly after ProcessEvent() | |
| virtual void | EndProcess () |
| To be executed at the end of the run (outside event loop) | |
| TRestAnalysisTree * | GetAnalysisTree () const |
| Return the local analysis tree (dummy) | |
| TCanvas * | GetCanvas () const |
| Get canvas. | |
| TRestAnalysisTree * | GetFullAnalysisTree () |
| std::vector< std::string > | GetListOfAddedObservables () |
| TRestRun * | GetRunInfo () const |
| Return the pointer of the hosting TRestRun object. | |
| virtual Long64_t | GetTotalBytes () const |
| virtual Long64_t | GetTotalBytesRead () const |
| Interface to external file reading, get the read bytes. To be implemented in external processes. | |
| Bool_t | isExternal () const |
| Return whether this process is external process. | |
| Int_t | LoadSectionMetadata () override |
| This method does some preparation of xml section. More... | |
| virtual void | NotifyAnalysisTreeReset () |
| In case the analysis tree is reset(switched to new file), some process needs to have action. | |
| virtual Bool_t | OpenInputFiles (const std::vector< std::string > &files) |
| std::vector< std::string > | ReadObservables () |
| void | RegisterAllObservables (Bool_t value=true) |
| virtual Bool_t | ResetEntry () |
| void | SetAnalysisTree (TRestAnalysisTree *tree) |
| Set analysis tree of this process, then add observables to it. | |
| void | SetCanvasSize (Int_t x, Int_t y) |
| Set canvas size. | |
| void | SetFriendProcess (TRestEventProcess *p) |
| Add friendly process to this process. | |
| void | SetObservableValidation (bool validate) |
| void | SetParallelProcess (TRestEventProcess *p) |
| Add parallel process to this process. | |
| void | SetRunInfo (TRestRun *r) |
| Set TRestRun for this process. | |
| Bool_t | singleThreadOnly () const |
| Return whether this process is single std::thread only. | |
| TRestEventProcess () | |
| ~TRestEventProcess () | |
| Public Member Functions inherited from TRestMetadata | |
| void | AddLog (std::string log="", bool print=true) |
| Add logs to messageBuffer. | |
| void | DoNotStore () |
| If this method is called the metadata information will not be stored in disk. | |
| TVector2 | Get2DVectorParameterWithUnits (std::string parName, TVector2 defaultValue=TVector2(-1, -1)) |
| TVector3 | Get3DVectorParameterWithUnits (std::string parName, TVector3 defaultValue=TVector3(-1, -1, -1)) |
| TString | GetCommit () |
| Returns the REST commit value stored in fCommit. | |
| std::string | GetConfigBuffer () |
| Returns the config section of this class. | |
| std::string | GetDataMemberValue (std::string memberName) |
| Get the value of data member as string. More... | |
| std::vector< std::string > | GetDataMemberValues (std::string memberName, Int_t precision=0) |
| Get the value of datamember as a vector of strings. More... | |
| TString | GetDataPath () |
| Returns a std::string with the path used for data storage. | |
| Double_t | GetDblParameterWithUnits (std::string parName, Double_t defaultValue=PARAMETER_NOT_FOUND_DBL) |
| Gets the value of the parameter name parName, after applying unit conversion. More... | |
| Bool_t | GetError () const |
| It returns true if an error was identified by a derived metadata class. | |
| TString | GetErrorMessage () |
| Returns a std::string containing the error message. | |
| TString | GetLibraryVersion () |
| Returns the REST libraty version stored in fLibraryVersion. | |
| TString | GetMainDataPath () |
| Gets a std::string with the path used for data storage. | |
| Int_t | GetNumberOfErrors () const |
| Int_t | GetNumberOfWarnings () const |
| std::string | GetParameter (std::string parName, TString defaultValue=PARAMETER_NOT_FOUND_STR) |
| Returns corresponding REST Metadata parameter from multiple sources. More... | |
| std::string | GetSectionName () |
| Returns the section name of this class, defined at the beginning of fSectionName. | |
| TRestStringOutput::REST_Verbose_Level | GetVerboseLevel () |
| returns the verboselevel in type of REST_Verbose_Level enumerator | |
| TString | GetVerboseLevelString () |
| returns the verbose level in type of TString More... | |
| TString | GetVersion () |
| Returns the REST version stored in fVersion. | |
| Int_t | GetVersionCode () |
| UInt_t | GetVersionMajor () const |
| UInt_t | GetVersionMinor () const |
| UInt_t | GetVersionPatch () const |
| Bool_t | GetWarning () const |
| It returns true if an error was identified by a derived metadata class. | |
| TString | GetWarningMessage () |
| Returns a std::string containing the warning message. | |
| TRestMetadata * | InstantiateChildMetadata (int index, std::string pattern="") |
This method will retrieve a new TRestMetadata instance of a child element of the present TRestMetadata instance based on the index given by argument, which defines the element order to be retrieved, 0 for first element found, 1 for the second element found, etc. More... | |
| TRestMetadata * | InstantiateChildMetadata (std::string pattern="", std::string name="") |
This method will retrieve a new TRestMetadata instance of a child element of the present TRestMetadata instance based on the name given by argument. More... | |
| Bool_t | isCleanState () const |
| Bool_t | isOfficialRelease () const |
| Int_t | LoadConfigFromBuffer () |
| Initialize data from a string element buffer. More... | |
| Int_t | LoadConfigFromElement (TiXmlElement *eSectional, TiXmlElement *eGlobal, std::map< std::string, std::string > envs={}) |
| Main starter method. More... | |
| Int_t | LoadConfigFromFile (const std::string &configFilename, const std::string §ionName="") |
| Give the file name, find out the corresponding section. Then call the main starter. | |
| virtual void | Merge (const TRestMetadata &) |
| TRestMetadata & | operator= (const TRestMetadata &) |
| void | Print () |
| Implementing TObject::Print() method. | |
| void | PrintConfigBuffer () |
| Print the config xml section stored in the class. More... | |
| void | PrintMessageBuffer () |
| Print the buffered message. | |
| void | PrintTimeStamp (Double_t timeStamp) |
| Print the current time on local machine. More... | |
| void | SetConfigFile (std::string configFilename) |
| set config file path from external | |
| void | SetError (std::string message="", bool print=true, int maxPrint=5) |
| A metadata class may use this method to signal that something went wrong. | |
| void | SetHostmgr (TRestManager *m) |
| Set the host manager for this class. | |
| void | SetSectionName (std::string sName) |
| set the section name, clear the section content | |
| void | SetVerboseLevel (TRestStringOutput::REST_Verbose_Level v) |
| sets the verbose level | |
| void | SetWarning (std::string message="", bool print=true, int maxPrint=5) |
| A metadata class may use this method to signal that something went wrong. | |
| void | Store () |
| If this method is called the metadata information will be stored in disk. | |
| TRestMetadata (const TRestMetadata &) | |
| virtual void | UpdateMetadataMembers () |
| Method to allow implementation of specific metadata members updates at inherited classes. | |
| virtual Int_t | Write (const char *name=nullptr, Int_t option=0, Int_t bufsize=0) |
| overwriting the write() method with fStore considered | |
| void | WriteConfigBuffer (std::string fName) |
| Writes the config buffer to a file in append mode. | |
| ~TRestMetadata () | |
| TRestMetadata default destructor. | |
Private Member Functions | |
| void | InitFromConfigFile () override |
| Function reading input parameters from the RML TRestRawVetoAnalysisProcess section. | |
| void | Initialize () override |
| Function to initialize input/output event members and define the section name and library version. | |
| void | LoadDefaultConfig () |
| Function to load the default config in absence of RML input. | |
Private Attributes | |
| TVector2 | fBaseLineRange |
| The range used to calculate the baseline parameters from the veto signal. | |
| std::vector< std::string > | fPeakAmp |
| Max peak amplitude observable names. | |
| std::vector< std::string > | fPeakTime |
| Peak Time observable names. | |
| Int_t | fPointsOverThreshold |
| Double_t | fPointThreshold |
| PointsOverThreshold() Parameters: | |
| TVector2 | fRange |
| The range used to calculate the veto signal parameters. | |
| TRestRawSignalEvent * | fSignalEvent |
| A pointer to the specific TRestRawSignalEvent. | |
| Double_t | fSignalThreshold |
| Int_t | fThreshold |
| Threshold of the vetoes. | |
| std::vector< double > | fTimeWindow |
| Peak time window for cut. | |
| std::vector< std::string > | fVetoGroupIds |
| Veto signal IDs per group. | |
| std::vector< std::string > | fVetoGroupNames |
| Veto group Names. | |
| std::vector< double > | fVetoSignalId |
| Veto signal IDs. | |
Additional Inherited Members | |
| Protected Types inherited from TRestEventProcess | |
| enum | REST_Process_Output { No_Output , Observable , Internal_Var , Full_Output } |
| Protected Member Functions inherited from TRestEventProcess | |
| void | BeginPrintProcess () |
| [name, cut range] | |
| void | CreateCanvas () |
| Create the canvas. | |
| void | EndPrintProcess () |
| TRestEventProcess * | GetFriend (const std::string &nameOrType) |
| TRestEventProcess * | GetFriendLive (const std::string &nameOrType) |
| template<class T > | |
| T * | GetMetadata () |
| Get a metadata object from the host TRestRun. More... | |
| TRestMetadata * | GetMetadata (const std::string &nameOrType) |
| size_t | GetNumberOfParallelProcesses () const |
| template<class T > | |
| T | GetObservableValue (const std::string &name) |
| TRestEventProcess * | GetParallel (int i) |
| template<class T > | |
| std::vector< T > | GetParallelDataMembers (T *member_of_process) |
| Get a list of data members from parallel processes which is same to this process's certain data member. More... | |
| template<class T > | |
| void | SetObservableValue (const std::string &name, const T &value) |
| Set observable value for AnalysisTree. More... | |
| Protected Member Functions inherited from TRestMetadata | |
| std::string | ElementToString (TiXmlElement *ele) |
| Convert an TiXmlElement object to string. More... | |
| TVector2 | Get2DVectorParameterWithUnits (std::string parName, TiXmlElement *e, TVector2 defaultValue=TVector2(-1, -1)) |
| TVector3 | Get3DVectorParameterWithUnits (std::string parName, TiXmlElement *e, TVector3 defaultValue=TVector3(-1, -1, -1)) |
| Double_t | GetDblParameterWithUnits (std::string parName, TiXmlElement *e, Double_t defaultVal=PARAMETER_NOT_FOUND_DBL) |
| TiXmlElement * | GetElement (std::string eleDeclare, TiXmlElement *e=nullptr) |
| Get an xml element from a given parent element, according to its declaration. | |
| TiXmlElement * | GetElementFromFile (std::string configFilename, std::string NameOrDecalre="") |
| Open an xml encoded file and find its element. More... | |
| TiXmlElement * | GetElementWithName (std::string eleDeclare, std::string eleName) |
| Get an xml element from the default location, according to its declaration and its field "name". | |
| TiXmlElement * | GetElementWithName (std::string eleDeclare, std::string eleName, TiXmlElement *e) |
| Get an xml element from a given parent element, according to its declaration and its field "name". | |
| std::string | GetFieldValue (std::string fieldName, std::string definition, size_t fromPosition=0) |
| Gets field value in an xml element string by parsing it as TiXmlElement. | |
| std::string | GetFieldValue (std::string parName, TiXmlElement *e) |
| Returns the field value of an xml element which has the specified name. More... | |
| std::string | GetKEYDefinition (std::string keyName) |
| Gets the first key definition for keyName found inside buffer starting at fromPosition. More... | |
| std::string | GetKEYDefinition (std::string keyName, size_t &Position) |
| std::string | GetKEYDefinition (std::string keyName, size_t &Position, std::string buffer) |
| std::string | GetKEYDefinition (std::string keyName, std::string buffer) |
| std::string | GetKEYStructure (std::string keyName) |
| Gets the first key structure for keyName found inside buffer after fromPosition. More... | |
| std::string | GetKEYStructure (std::string keyName, size_t &Position) |
| std::string | GetKEYStructure (std::string keyName, size_t &Position, std::string buffer) |
| std::string | GetKEYStructure (std::string keyName, size_t &Position, TiXmlElement *ele) |
| std::string | GetKEYStructure (std::string keyName, std::string buffer) |
| TiXmlElement * | GetNextElement (TiXmlElement *e) |
| Get the next sibling xml element of this element, with same eleDeclare. | |
| std::string | GetParameter (std::string parName, size_t &pos, std::string inputString) |
| Returns the value for the parameter name parName found in inputString. More... | |
| std::string | GetParameter (std::string parName, TiXmlElement *e, TString defaultValue=PARAMETER_NOT_FOUND_STR) |
| Returns the value for the parameter named parName in the given section. More... | |
| std::pair< std::string, std::string > | GetParameterAndUnits (std::string parname, TiXmlElement *e=nullptr) |
| Returns the unit string of the given parameter of the given xml section. More... | |
| std::map< std::string, std::string > | GetParametersList () |
| It retrieves a map of all parameter:value found in the metadata class. | |
| TString | GetSearchPath () |
| virtual void | InitFromRootFile () |
| Method called after the object is retrieved from root file. | |
| void | ReadAllParameters () |
| Reflection methods, Set value of a datamember in class according to TRestMetadata::fElement. More... | |
| void | ReadParametersList (std::map< std::string, std::string > &list) |
| It reads a parameter list and associates it to its corresponding metadata member. par0 --> fPar0. | |
| std::string | ReplaceConstants (const std::string buffer) |
| Identifies "constants" in the input buffer, and replace them with corresponding value. More... | |
| std::string | ReplaceVariables (const std::string buffer) |
| Identifies environmental variable replacing marks in the input buffer, and replace them with corresponding value. More... | |
| void | ReSetVersion () |
| Resets the version of TRestRun to REST_RELEASE. Only TRestRun is allowed to update version. | |
| std::string | SearchFile (std::string filename) |
| Search files in current directory and directories specified in "searchPath" section. More... | |
| void | SetLibraryVersion (TString version) |
| Set the library version of this metadata class. | |
| TiXmlElement * | StringToElement (std::string definition) |
| Parsing a string into TiXmlElement object. More... | |
| TRestMetadata () | |
| TRestMetadata default constructor. | |
| TRestMetadata (const char *configFilename) | |
| constructor | |
| void | UnSetVersion () |
| Resets the version of TRestRun to -1, in case the file is old REST file. Only TRestRun is allowed to update version. | |
| Protected Attributes inherited from TRestEventProcess | |
| TRestAnalysisTree * | fAnalysisTree = nullptr |
| TCanvas * | fCanvas = nullptr |
| < Canvas for some viewer event | |
| TVector2 | fCanvasSize |
| Canvas size. | |
| std::vector< std::pair< std::string, TVector2 > > | fCuts |
| Stores cut definitions. Any listed observables should be in the range. More... | |
| bool | fDynamicObs = false |
| It defines whether to use added observables only or all the observables appear in the code. | |
| bool | fIsExternal = false |
| It defines if the process reads event data from an external source. | |
| std::map< std::string, int > | fObservablesDefined |
| Stores the list of all the appeared process observables in the code. More... | |
| std::map< std::string, int > | fObservablesUpdated |
| Stores the list of process observables updated when processing this event. | |
| bool | fReadOnly = false |
| not used, keep for compatibility | |
| TRestRun * | fRunInfo = nullptr |
| < Pointer to TRestRun object where to find metadata. | |
| bool | fSingleThreadOnly = false |
| bool | fValidateObservables = false |
| It defines if observable names should be added to the validation list. | |
| Protected Attributes inherited from TRestMetadata | |
| std::string | configBuffer |
| The buffer where the corresponding metadata section is stored. Filled only during Write() | |
| std::string | fConfigFileName |
| Full name of the rml file. More... | |
| std::map< std::string, std::string > | fConstants |
| Saving a list of rml constants. name-value std::pair. Constants are temporary for this class only. | |
| TiXmlElement * | fElement |
| Saving the sectional element together with global element. | |
| TiXmlElement * | fElementGlobal |
| Saving the global element, to be passed to the resident class, if necessary. | |
| Bool_t | fError = false |
| It can be used as a way to identify that something went wrong using SetError method. | |
| TString | fErrorMessage = "" |
| A std::string to store an optional error message through method SetError. | |
| TRestManager * | fHostmgr |
| All metadata classes can be initialized and managed by TRestManager. | |
| Int_t | fNErrors = 0 |
| It counts the number of errors notified. | |
| Int_t | fNWarnings = 0 |
| It counts the number of warnings notified. | |
| std::string | fSectionName |
| Section name given in the constructor of the derived metadata class. | |
| Bool_t | fStore |
| This variable is used to determine if the metadata structure should be stored in the ROOT file. | |
| std::map< std::string, std::string > | fVariables |
| Saving a list of rml variables. name-value std::pair. | |
| TRestStringOutput::REST_Verbose_Level | fVerboseLevel |
| Verbose level used to print debug info. | |
| Bool_t | fWarning = false |
| It can be used as a way to identify that something went wrong using SetWarning method. | |
| TString | fWarningMessage = "" |
| It can be used as a way to identify that something went wrong using SetWarning method. | |
| std::string | messageBuffer |
| The buffer to store the output message through TRestStringOutput in this class. | |
| endl_t | RESTendl |
| Termination flag object for TRestStringOutput. | |
| TRestRawVetoAnalysisProcess::TRestRawVetoAnalysisProcess | ( | const char * | configFilename | ) |
Constructor loading data from a config file.
The path to the config file can be specified using full path, absolute or relative.
If the file is not found then REST will try to find the file on the default paths defined in REST Framework, usually at the REST_PATH installation directory. Additional search paths may be defined using the parameter searchPath in globals section. See TRestMetadata description.
| configFilename | A const char* giving the path to an RML file. |
Definition at line 162 of file TRestRawVetoAnalysisProcess.cxx.
| void TRestRawVetoAnalysisProcess::LoadConfig | ( | const std::string & | configFilename, |
| const std::string & | name = "" |
||
| ) |
Function to load the configuration from an external configuration file.
If no configuration path is defined in TRestMetadata::SetConfigFilePath the path to the config file must be specified using full path, absolute or relative.
| configFilename | A const char* giving the path to an RML file. |
| name | The name of the specific metadata. It will be used to find the corresponding TRestRawVetoAnalysisProcess section inside the RML. |
Definition at line 193 of file TRestRawVetoAnalysisProcess.cxx.
1.9.1